shiftR1.5 package

Fast Enrichment Analysis via Circular Permutations

cramerV

Calculate Cramer's V (phi) Coefficient

enrichmentAnalysis

Fast Enrichment Testing via Circular Permutations on Non-Binary Outcom...

getOffsets

Generate Random or Uniformly Spaced Permutation Offsets

matchDatasets

Match Two Data Sets by Location

shiftR-package

Fast Enrichment Analysis via Circular Permutations

shiftrPermBinary

Fast Enrichment Testing on Binary Outcomes via Circular Permutations

shiftrPrepare

Prepare Data for Fast Circular Permutation Analysis

simulate

Generate Artificial Data for Tests and Illustrations

singlePermutation

Count Feature Overlap Under a Permutation

Download source packageRead PDF manual

Fast enrichment analysis for locally correlated statistics via circular permutations. The analysis can be performed at multiple significance thresholds for both primary and auxiliary data sets with efficient correction for multiple testing.

  • Maintainer: Andrey A Shabalin
  • License: LGPL-3
  • Last published: 2019-03-22

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