simlandr0.4.0 package

Create and modify argument sets, then make an argument grid for batch ...

Convert a list of simulation output to a mcmc.list object

as.mcmc.list generic function

Attach all matrices in a batch simulation

Get a ggplot2 layer from a barrier object

Autolayer generic function

A simple gradient simulation function for testing

Simulate multiple 1-3D Markovian Stochastic Differential Equations

Pipe operator

Make plots from landscape objects

Save landscape plots

Perform a batch simulation.

Functions for calculating energy barrier from landscapes

Graphical diagnoses to check if the simulation converges

Fill a vector of values into a structure list.

Summarize the barrier height from a barrier object

Get the probability distribution from a landscape object

Get a ggplot2 layer from a barrier object

Class "hash_big_matrix": big matrix with a md5 hash reference

Make a matrix of 2D static landscape plots for one or two parameters

Make 2D static landscape plot for a single simulation output

Make a tidy data.frame from smooth 2d distribution matrix

Make 3d animations from multiple simulations

Make a matrix of 3D static landscape plots for one or two parameters

Make 3D static landscape plots from simulation output

Make 4D static space-color plots from simulation output

Make a grid for calculating barriers for 2d landscapes

Make a grid for calculating barriers for 3d landscapes

Calculate 1D, 2D, or 3D kernel smooth distribution

Modify a single simulation

A simple non-gradient simulation function for testing

A simple simulation function for testing

A simple yet meaningful simulation function for testing

Simulate 1-3D Markovian Stochastic Differential Equations

simlandr: Simulation-Based Landscape Construction for Dynamical System...

Summarize the barrier height from a barrier object