Simulate Disease Outbreak Line List and Contacts Data
Convert <epiparameter> or NULL to function
Coerce and store <data.frame> subclass to <data.frame> and restore...
Create a list of configuration settings for some details of `sim_linel...
Add line list event dates and case information as columns to infectiou...
Introduce user-specified proportion of custom missing values into a `<...
Anonymise names
Check if <data.frame> defining either age-stratified hospitalisation...
Check if object is line list from sim_linelist()
Check if arguments input to simulation function are valid
Cross check the onset-to-hospitalisation or -death arguments are compa...
Sample names using randomNames::randomNames()
Sample the onset-to-outcome time conditional that the outcome is after...
Internal simulation function called by the exported simulation functio...
Simulate a random network branching process model with a probability o...
Create messy line list data
Simulate contacts for an infectious disease outbreak
Simulate a line list
Simulate a line list and a contacts table
simulist: Simulate Disease Outbreak Line List and Contacts Data
Adjust or subset a line list to account for right truncation
Tools to simulate realistic raw case data for an epidemic in the form of line lists and contacts using a branching process. Simulated outbreaks are parameterised with epidemiological parameters and can have age-structured populations, age-stratified hospitalisation and death risk and time-varying case fatality risk.
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