Simulate Disease Outbreak Line List and Contacts Data
Convert <epiparameter> or NULL to function
Create a list of configuration settings for some details of `sim_linel...
Add line list event dates and case information as columns to infectiou...
Anonymise names
Check if <data.frame> defining age structure of population is correc...
Check if <data.frame> defining age-stratified hospitalisation or dea...
Check if arguments input to simulation function are valid
Cross check the onset-to-hospitalisation or -death arguments are compa...
Sample names using randomNames::randomNames()
Internal simulation function called by the exported simulation functio...
Simulate a random network branching process model with a probability o...
Simulate contacts for an infectious disease outbreak
Simulate a line list
Simulate a line list and a contacts table
simulist: Simulate Disease Outbreak Line List and Contacts Data
Tools to simulate realistic raw case data for an epidemic in the form of line lists and contacts using a branching process. Simulated outbreaks are parameterised with epidemiological parameters and can have age structured populations, age-stratified hospitalisation and death risk and time-varying case fatality risk.
Useful links