Web Application for the SSD Module of the MOSAIC Platform
Graphical representation of named toxicity censored data
Graphical representation of named toxicity uncensored data
Custom ggplot theme created for MOSAIC bioacc overwriting theme_bw
Generate bootstrap sample(s) for a list of fit(s) and check their conv...
Get HCx values for a given x from a bootstrap
Fit the specified distributions to the given data
Get HCx values from fit or bootstrap
Get fit(s) parameters in HTML format for shiny outputs
Create a label for x axis based on concentration unit and log scale
Graphical representation of grouped toxicity censored data
Graphical representation of grouped toxicity uncensored data
Create a pretty confidence interval ggplot
Add confidence interval(s) to an existing fitted distribution ggplot
Graphical representation of fitted distribution(s)
Determines the appropriate bootstrap function based on a fit object
Graphical representation of censored data
Generate a script according to user in-app inputs
Combine several bootstrap samples into a single bootdist or `bootdis...
Graphical representation of toxicity data with additional elements
Take a data.frame of censored toxicity data and order them like `fitdi...
Objects exported from other packages
Run the Shiny Application
Custom toggle switch input for shiny UI
Test the approximate equality of the quantiles from several bootstrap ...
Web application using 'shiny' for the SSD (Species Sensitivity Distribution) module of the MOSAIC (MOdeling and StAtistical tools for ecotoxICology) platform. It estimates the Hazardous Concentration for x% of the species (HCx) from toxicity values that can be censored and provides various plotting options for a better understanding of the results. See our companion paper Kon Kam King et al. (2014) <doi:10.48550/arXiv.1311.5772>.
Useful links