statgenGWAS1.0.9 package

Genome Wide Association Studies

codeMarkers

Code and impute markers

dropsData

DROPS data sets

gData

S3 Class gData

kinship

Functions for calculating kinship matrices

plot.gData

Plot function for the class gData

plot.GWAS

Plot function for the class GWAS

readPLINK

Read PLINK binary data

runSingleTraitGwas

Perform single-trait GWAS

statgenGWAS-package

statgenGWAS: Genome Wide Association Studies

summary.gData

Summary function for the class gData

summary.GWAS

Summary function for the class GWAS

Download source packageRead PDF manual

Fast single trait Genome Wide Association Studies (GWAS) following the method described in Kang et al. (2010), <doi:10.1038/ng.548>. One of a series of statistical genetic packages for streamlining the analysis of typical plant breeding experiments developed by Biometris.

  • Maintainer: Bart-Jan van Rossum
  • License: GPL-3
  • Last published: 2022-10-13

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