streamDAG1.5-9 package

Analytical Methods for Stream DAGs

A.mult

Raise an adjacency matrix to some power

A

Arcs of a directed graph

arc.pa.from.nodes

Obtain arc stream activity outcomes based on bounding nodes

assort

Assortativity

bern.length

Botter and Durighetto Bernoulli stream length

beta.posterior

Posterior Beta and Inverse-beta summaries

biv.bern

Bivariate Bernoulli Distribution

degree.dists

Potential degree distributions

delete.arcs.pa

Delete arcs based on presence absence data

delete.nodes.pa

Delete nodes based on presence absence data

dinvbeta

Inverse Beta Distribution

efficiency

Local and global efficiency

get.AIMS.data.rd

Loads AIMS dataset associated with a particular AIMS graph

global.summary

Global Summary

harary

Harary Index

I.D

Generalized DAG indices

ICSL

Integral connectivity scale length (ICSL)

imp.closeness

Improved Closeness Centrality

intact_to_sink

Size of intact network that feeds into the sink or a particular node

isle

Detects and defines islands in a streamDAG

konza_coords

Coordinates of nodes in the Konza Praire dataset

local.summary

local (nodal) summaries of a DAG

multi.path.visibility

Path Visibilities

n.sources

Identify source and sink nodes

path.lengths.sink

Path Lengths

plot_degree.dist

Plot degree distributions

R_bounds

Bounds for the correlation of two (or more) Benrnoulli random variable...

size.intact.to.arc

Size of the intact network above an arc

spath.lengths

Shortest path lengths and number of paths

spatial.plot

Spatial plot of an igraph object or stream shapefile

STIC.RFimpute

A wrapper for missForest for random forest STIC imputation

stream.order

Strahler or Shreve stream order of a stream DAG

streamDAGs

Stream DAG datasets

vector_segments

Functions for overlaying networks on shapefiles

Provides indices and tools for directed acyclic graphs (DAGs), particularly DAG representations of intermittent streams. A detailed introduction to the package can be found in the publication: "Non-perennial stream networks as directed acyclic graphs: The R-package streamDAG" (Aho et al., 2023) <doi:10.1016/j.envsoft.2023.105775>, and in the introductory package vignette.

  • Maintainer: Ken Aho
  • License: GPL (>= 2)
  • Last published: 2025-01-14