surv_model_performance function

Helper functions for model_performance.R

Helper functions for model_performance.R

surv_model_performance( explainer, ..., times = NULL, type = "metrics", metrics = NULL )

Arguments

  • explainer: an explainer object - model preprocessed by the explain() function
  • ...: other parameters, currently ignored
  • times: a numeric vector, time points at which ROC curves are calculated if type == "roc" or at which metrics are calculated if type == "metrics". Note: if type=="roc" this parameter is obligatory
  • type: character, either "metrics" which calculates performance metrics or "roc" which calculates ROC curves at specific time points
  • metrics: a named vector containing the metrics to be calculated. The values should be standardized loss functions. The functions can be supplied manually but has to have these named parameters (y_true, risk, surv, times), where y_true represents the survival::Surv object with observed times and statuses, risk is the risk score calculated by the model, and surv is the survival function for each observation evaluated at times.

Returns

Either a list when type == "metrics" or a data.frame if type == "roc"

  • Maintainer: Mikołaj Spytek
  • License: GPL (>= 3)
  • Last published: 2023-10-24