tourr1.2.0 package

Tour Methods for Multivariate Data Visualisation

display_pca

Display tour path with principal component scores with original axes

display_pcp

Parallel coordinates tour path animation.

anaglyph

Draw anaglyphs with base graphics.

anchored_orthogonal_distance

Calculate orthogonal distances

andrews

Compute Andrews' curves

angular_breaks

Returns n equidistant bins between -pi and pi

animate

Animate a tour path.

anomaly_index

Anomaly index.

areColors

Test if all entries are colors

bases_little

Generate bases for the little tour

basis_init

Generate initial basis.

basis_nearby

Generate nearby bases, e.g. for simulated annealing.

basis_random

Generate a random basis

blank_plot

Set up a blank plot to display data projections

center

Center a numeric vector by subtracting off its mean.

check_freezer_safe

Check matrix is a valid frozen matrix

cmass

Central mass index.

compute_v_rel

If not set, compute epsilon based on half_range

correct_orientation

check if the current and target bases are of the same orientation

cumulative_radial

Calculate radial cumulative distribtuion

dcor2d

Distance correlation index.

dependence_tour

A dependence tour path.

display_andrews

Andrews' curves tour path animation.

display_density2d

Display tour path with a density and scatterplot

display_depth

Display 3d projection with depth cues

display_dist

1d distribution tour path animation.

display_faces

Chernoff faces tour path animation.

display_groupxy

Display 2D tour projections displayed separately by groups

display_idx

Display a 1D linear aggregation index

display_image

Image tour path animation.

display_sage

Display tour path with a sage scatterplot

display_scatmat

Scatterplot matrix tour path animation.

display_slice

Display tour path with a sliced scatterplot

display_stars

Star glyph tour path animation.

display_stereo

Anaglpyh tour path animation.

display_trails

Display tour path with trails

display_xy

Display tour path with a scatterplot

draw_slice_center

Draw slice center guide with base graphics

draw_tour_axes

Draw tour axes on the projected data with base graphics

estimate_eps

Estimate cutoff eps for section pursuit.

eucl_norm_sq

Calculate the squared Euclidean norm of a vector x

find_best_dir

Find the most promising direction to travel in.

find_best_frozen_dir

Find most promising direction in frozen space.

find_frozen_path_peak

Find most highest peak along frozen geodesic.

find_path_peak

Find the most interesting projection along a geodesic.

find_platform

Find the platform Find the platform being used by the user

Flea-measurements

Flea beatle measurements

freeze

Freeze and thaw matrices

frozen_guided_tour

The frozen guided tour

frozen_tour

A frozen tour path.

geodesic_info

Calculate information required to interpolate along a geodesic path be...

geodesic_path

Generate geodesic path.

grand_tour

A grand tour path.

guided_anomaly_tour

A guided anomaly tour path.

guided_section_tour

A guided section tour path.

guided_tour

A guided tour path.

holes

Holes index.

interpolate

Interpolate geodesically between bases.

is_orthonormal

Test if a numeric matrix is orthonormal.

Laser-measurements

Turnable laser measurements from Bellcore

lda_pp

LDA projection pursuit index.

linear_breaks

Returns n equidistant bins between a and b

little_tour

A little tour path.

local_tour

A local tour path.

mahal_dist

Calculate the Mahalanobis distance between points and center.

manual_slice

Manually slice along a variable axis.

mapColors

Map vector of factors to color

mapShapes

Map vector of factors to pch

new_geodesic_path

Generate a geodesic path between bases supplied by generator

new_tour

Create a new tour.

norm_bin

Normality index.

normalise

Normalise a numeric matrix.

Olive-oil-measurements

Olive oil samples from Italy

orthonormalise

Orthonormalise using modified Gram-Schmidt process.

orthonormalise_by

Orthonormalise one matrix by another.

Ozone-measurements

Monthly ozone measurements over Central America

path_curves

Draw the path that the geodesics took.

path_dist

Compute distance matrix from bases.

path_index

Compute index values for a tour history.

paths_index

Compute index value for many histories.

pda_pp

PDA projection pursuit index.

Places-Ratings

Ratings of different locations across North America

planned-tour

A planned tour path.

plot.path_curve

Plot history curves.

plot.path_index

Plot history index with ggplot2.

proj_dist

Calculate the distance between two bases.

project3d

Stereographic projection

radial_bin_weight_inv

Inverse weights for rescaling counts in radial bins.

radial_tour

A radial tour path.

Rat-CNS

Rat CNS Gene Expression

render

Render frames of animation to disk

render_anim

Render a set of animation frames

render_gif

Render frames of animation to a gif file

render_proj

Render plotly animation frame

rescale

Rescale a matrix or data frame

save_history

Save tour history.

search_better

Search for a better projection near the current projection.

search_better_random

Search for a better projection using simulated annealing

search_frozen_geodesic

A pseudo-derivative, line search algorithm along frozen geodesics.

search_geodesic

A pseudo-derivative, line search algorithm.

search_polish

Search very locally to find slightly better projections to polish a br...

search_posse

Search for a better projection based on Poss, 1995

slice_binning

Separately binning observations inside and outside the slice.

slice_index

Section pursuit index.

sphere_data

Sphere a matrix (or data frame) by transforming variables to principal...

splines2d

Spline based index.

step_angle

Step along an interpolated path by angle in radians.

step_fraction

Step along an interpolated path by fraction of path length.

to_stop

Prints information on how to stop the output

tourr-package

tourr: Tour Methods for Multivariate Data Visualisation

Tropical-Atmosphere-Ocean

Tropical Atmosphere Ocean data

weights_bincount_radial

Computes weights for the rescaling of radial bin counts.

xnul

A null function

Implements geodesic interpolation and basis generation functions that allow you to create new tour methods from R.

  • Maintainer: Dianne Cook
  • License: MIT + file LICENSE
  • Last published: 2024-04-20