Trees and Traits Simulations
Crudely estimates extinction and speciation
dispRity interface for treats objects
Drop things from a treats object
drop.tip.treats
events.conditions
Events modifications
link.traits
Make birth death parameters
make.events
make.modifiers
make.traits
Make a treats object
Maps a trait on a tree
Modifiers
Get parent traits
Plot treats objects
Prints a treats object.
Trait processes
Makes a transition matrix
Diversity and disparity simulator
A modular package for simulating phylogenetic trees and species traits jointly. Trees can be simulated using modular birth-death parameters (e.g. changing starting parameters or algorithm rules). Traits can be simulated in any way designed by the user. The growth of the tree and the traits can influence each other through modifiers objects providing rules for affecting each other. Finally, events can be created to modify both the tree and the traits under specific conditions ( Guillerme, 2024 <DOI:10.1111/2041-210X.14306>).