Generates marginal fixed effects plots of one or more covariates from a ubmsFit submodel. For each plot, the focal covariate is allowed to vary across its range (or possible discrete values, for a factor), while the other covariates are held at their medians or reference levels. Random effects are ignored.
## S4 method for signature 'ubmsFit'plot_effects( object, submodel, covariate =NULL, level =0.95, draws =1000, smooth =NULL,...)## S4 method for signature 'ubmsFit'plot_marginal( object, submodel, covariate =NULL, level =0.95, draws =1000, smooth =NULL,...)
Arguments
object: A fitted model of class ubmsFit
submodel: Submodel to get plots for, for example "det"
covariate: Plot a specific covariate; provide the name as a string
level: Probability mass to include in the uncertainty interval
draws: Number of draws from the posterior to use when generating the plots. If fewer than draws are available, they are all used
smooth: Smoother span (f) value used for LOWESS smoothing of the upper and lower credible interval bounds for a continuous covariate. No smoothing is done if NULL. A reasonable value to try is 0.05. The larger the value, the smoother the curve. As with all smoothing, use with caution
...: Currently ignored
Returns
A ggplot if a single covariate is plotted, or an object of class grob if there are multiple covariates/panels