untb1.7-7-1 package

Ecological Drift under the UNTB

alonso

Various functions from Alonso and McKane 2004

bci

Barro Colorado Island (BCI) dataset

census

Construct, coerce, and test for a census object

count

Construct, coerce, and test for a count object

display.untb

Animation of neutral ecological drift

etienne

Etienne's sampling formula

expected.abundance

Expected abundances under the neutral model

extractor

Extract rows of a database in count form

fisher

Various functionality to implement Fisher's logseries

isolate

Randomly select a subset of an ecosystem

logkda

Etienne's K(D,A)

logS1

logarithms of Stirling numbers of the first kind

no.of.ind

Ecosystem diagnostics

optimal.params.gst

Estimation of local immigration using GST(k) statistics

optimal.params.sloss

Estimation of neutral community parameters using a two-stage maximum-l...

optimal.prob

Returns an estimate of the fundamental biodiversity number

phi

Hubbell's phi

plot.count

Abundance curves

plus

Add two count objects

preston

Preston diagram of an ecosystem

print.preston

Print and plot objects of class Preston

print.summary.count

Print method for summary objects

rand.neutral

Random neutral ecosystem

simpson

Simpson's diversity index

species.count

Ecosystem diagnostics for output of untb()

summary

Summary methods for count and census objects

theta.prob

Posterior probabilities for theta

untb.package

Unified neutral theory of biodiversity

untb

Ecological drift simulation under the Unified Neutral Theory of Biodiv...

vallade

Various functions from Vallade and Houchmandzadeh

volkov

Expected frequency of species

zsm

Zero sum multinomial distribution as derived by McKane

Hubbell's Unified Neutral Theory of Biodiversity.

  • Maintainer: Robin K. S. Hankin
  • License: GPL
  • Last published: 2024-09-11