Access Vegetation Databases and Treat Taxonomy
Search taxonomic reference lists including concept synonomy and taxono...
Combine species in vegetation matrix
Indicate site conditions with community weighted mean values of traits...
Download taxonomic databases
database path
This is an example vegetation dataset to be included in package vegdat...
#' Parents of a taxon
Parse taxon strings into genus part and epitheta
Recode taxon names, lettercodes or ID's
Query and get data back into a data.frame
src - dplyr src objects
Search synonyms of a taxon
Syntaxonomic frequency tables
Search taxonomic reference lists including concept synonomy and taxono...
Taxon reference list to be used
Standardisation of taxonomic names, especially taxon rank indicators a...
Remove name authors from taxon names
Simplify name parts for better string matching
Handling of taxonomy in vegetation data.
Standardise taxon list field names to match the Taxonomic Concept Tran...
Check bibliographic references from Turboveg codes
Cover code translation
Read list of available Turboveg2 databases in given Turboveg directory
Where is your Turboveg 2 installation path or the directory with Speci...
Show metainfo of vegetation database or ecodbase
Dataframe of plot-species observations directly from Turboveg
Reads a Turboveg XML file
Rename data.frame columns to match Turboveg 2 conventions
Load site data from Turboveg Database
Load species traits from Turboveg reference list
Tabulates vegetation tables from Turboveg database
Write species-plot observations and site information to Turboveg datab...
Functions to access data from vegetation databases and evaluate taxon ...
vegdata
Handling of vegetation data from different sources ( Turboveg 2.0 <https://www.synbiosys.alterra.nl/turboveg/>; the German national repository <https://www.vegetweb.de> and others. Taxonomic harmonization (given appropriate taxonomic lists, e.g. the Euro+Med list <https://eurosl.infinitenature.org>).