add_animation function

Add mode bar button to rotate the plot

add_animation(
  p,
  rotate_icon_path = NULL,
  stop_icon_path = NULL,
  rotate_colour = "#c7c7c7",
  stop_colour = "#ff6347",
  scale = "scale(0.4) translate(-4, -4)",
  speed = 320,
  shiny_event_names = c()
)

Arguments

• p: The volcano3D plot
• rotate_icon_path: The svg icon path for rotation. If NULL a play button is used
• stop_icon_path: The svg icon path for stop button. If NULL a pause button is used
• rotate_colour: The colour for the rotate button (default="#c7c7c7")
• stop_colour: The colour for the stop button (default='#ff6347', a.k.a 'tomato')
• scale: Scaling for rotation button
• speed: The rotation speed
• shiny_event_names: If using shiny, pass in any shiny event names which should stop rotation when triggered (e.g. shiny_event_names = c('replot'))

Returns

Returns a rotating cylindrical 3D plotly plot featuring variables on a tri-axis radial graph with the -log10(multi-group test p-value) on the z-axis

Examples

data(example_data)
syn_polar <- polar_coords(outcome = syn_example_meta$Pathotype,
                          data = t(syn_example_rld))

p <- volcano3D(syn_polar, 
    label_rows = c("COBL", "TREX2"))
add_animation(p)

References

Lewis, Myles J., et al. (2019). c("\n", "Molecular portraits of early rheumatoid arthritis identify clinical and\n", "treatment response phenotypes.")

Cell reports, 28 :9

See Also

volcano3D