Continuous Mapping of Genetic Diversity
wingen: Continuous Mapping of Genetic Diversity
Create a moving window map of genetic diversity using a circle window
General function for making circular moving window maps
Create a raster from coordinates
Mask moving window maps
Get a matrix of geographic distances for circle_gd
Get a matrix of resistance distances for resist_gd
Plot moving window map of sample counts
Plot moving window map of genetic diversity
Krige moving window maps
Middle earth example
Mini middle earth example
Plot moving window map of sample counts
Plot moving window map of genetic diversity
Preview moving window and sample counts
Create a moving window map of genetic diversity based on resistance
General function for making resistance-based maps
Convert a vcf to a dosage matrix
Create a moving window map of genetic diversity
General function for making moving window maps
Generate continuous maps of genetic diversity using moving windows with options for rarefaction, interpolation, and masking as described in Bishop et al. (2023) <doi:10.1111/2041-210X.14090>.