Extra Functionality for the 'xpose' Package
Describe parameter associations
Add relationship(s) to an xpose_set
Add one or more xpdb
objects to an xpose_set
Add individual objective function to data
Non-simulation based likelihood model diagnostic
Verify validity of level list
Check an xpose_set
object
Convenience functions used in package
Backfill utility for descriptions
Visualize xpose_set
Display deltaOFV values across xpose_set
Check if any xpose_data objects are repeated in xpose_set
Master xpdb editing function
Eta categorical covariate plots (typical)
Eta continuous covariate plots (typical)
Expose a model parameter of xpdb objects in an xpose_set
Expose a property of xpdb objects in an xpose_set
Place .problem, .subprob and .method into environment consistently
Filtration method for xpose_set
Focus on an xpdb object in an xpose_set
Combine a property from all components of a franken_xpdb
Combine several xpose_data
objects into one
Access model parameters
Generic function to extract a property from a model summary
Get full index for xpose_data data
Get shrinkage estimates from model summary
Grab processed xpose_plot
Binary check if LHS is parent of LHS
Grid plots
Objective function changes across models
Add simulation counter
Basic class checker for xp_xtras
Level-defining helper functions
For a categorical DV variable, show associated probabilities
Updates to list_vars
Model average plots
Create a model-averaged xpose data object
Add, remove or rename variables in an xpdb
Transform parameter values in place
Mutation method for xpose_set
Select parameter row number
Pipe operator
Compare model predictions
Convert levels list into tibble
Pulling method for xpose_set
Objects exported from other packages
Renaming method for xpose_set
Reportable digits for model fit
Convert xpose_set to a nested list.
Convenience wrapper for tidyselect
Selection method for xpose_set
Base model for xpose_set
Set probability columns for categorical endpoints
Set an xpose
option
Set a summary property
Set variable levels
Set variable types
Set variable types
Set variable types
Set variable types
Change colors of shark plots
Individual contributions to dOFV
Group/ungroup and summarize variables in an xpdb
Typical processing for plots of 2 sets
Translate values to levels
Specific waterfall plots
Ensure consistent style with GGally
functions
xp_var
Method
Extra theme defaults
Convert an object to an xpose_data
and xp_xtras
object
Updated version of the xpose4 theme
Default xpose boxplot function
Wrapper around ggpairs
Generate a set of xpdb
objects
xpose.xtras: Extra Functionality for the 'xpose' Package
Determine lineage within a set
Waterfall plot
Adding some at-present missing functionality, or functions unlikely to be added to the base 'xpose' package. This includes some diagnostic plots that have been missing in translation from 'xpose4', but also some useful features that truly extend the capabilities of what can be done with 'xpose'. These extensions include the concept of a set of 'xpose' objects, and diagnostics for likelihood-based models.