Analysis of Numerical Plankton Images
The ZooImage error correction (manual validation) tools
Various file utility functions used by ZooImage
The ZooImage GUI (Graphical User Interface)
Various GUI utility functions used by ZooImage
Function to import data from the FlowCAM
Various utility functions used by ZooImage
Check .zic files (ZooImage Categories)
Create and manipulate 'ZIClass' objects
Manage .zid files (ZooImage Data)
Manage .zidb files (ZooImage Databases)
ZIE (ZooImage Extension) manipulate .zie files to add custom import, e...
Manipulate .zim files (ZooImage Metadata/Measurements)
Zip and unzip raw .tif images for ZooImage and embed metadata
Various function to calculate results ('ZIRes' object)
Manipulate .zis files (ZooImage Samples description)
Manipulate training and testsets 'ZITrain'/'ZITest' objects
ZooImage: analysis of digital plankton images
A free (open source) solution for analyzing digital images of plankton. In combination with ImageJ, a free image analysis system, it processes digital images, measures individuals, trains for automatic classification of taxa, and finally, measures plankton samples (abundances, total and partial size spectra or biomasses, etc.).