simulateGenome function

simulateGenome

simulateGenome

Method of Model class (access via model<functionname>,wheremodelisanobjectinitializedbyinitializeModelObject).WillsimulateaversionofthegivengenomeusingthecurrentsetofparametersstoredintheParameterobject.ThiscanbewrittentoaFASTAfileusinggenome<function name>, where model is an object initialized by initializeModelObject). Will simulate a version of the given genome using the current set of parameters stored in the Parameter object. This can be written to a FASTA file using genomewriteFasta(,simulated = TRUE).

Arguments

  • genome: a Genome object initialized by initializeGenomeObject