Compare_VertexClasses_sharedEdgeFeatures function

Table VertexClass pairs of shared Edge Features

Compare VertexClass pairs of the shared Edge Features of two treatments (e.g., lipid-class-pairs per shared gene)

Compare_VertexClasses_sharedEdgeFeatures(
  Treat1_path,
  Treat2_path,
  OutputName = "Shared_Genes_and_Edges_Treat1vsTreat2.csv",
  Treat1Name = "Treat1",
  Treat2Name = "Treat2"
)

Arguments

• Treat1_path: TableForNetwork_file (file generated by CoNI) with path of Treatment 1
• Treat2_path: TableForNetwork_file (file generated by CoNI) with path of Treatment 2
• OutputName: Output file name with path
• Treat1Name: Name of treatment one, default Treat1
• Treat2Name: Name of treatment one, default Treat2

Returns

A data.frame with all possible vertex-class pairs and their numbers per edge-feature and treatment.

Examples

#For an example see the vignette