Execute and View Data Quality Checks on OMOP CDM Database
Convert JSON results file case
Applies the 'Not Applicable' status to a single check
Determines if check should be notApplicable and the notApplicableReaso...
Determines if all checks required for 'Not Applicable' status are in t...
Internal function to evaluate the data quality checks against given th...
Internal function to define the id of each check.
Determines if all checks are present expected to calculate the 'Not Ap...
Internal function to determine if the connection needs auto commit
Internal function to send the fully qualified sql to the database and ...
Internal function to read threshold files
Internal function to put the results of each quality check into a data...
Internal function to run and process each data quality check.
Internal function to summarize the results of the DQD run.
Internal function to write the check results to a csv file.
Write DQD results to json
Internal function to write the check results to a table in the databas...
Execute DQ checks
List DQ checks
Re-evaluate Thresholds
View DQ Dashboard
Write DQD results database table to json
Write JSON Results to CSV file
Write JSON Results to SQL Table
Assesses data quality in Observational Medical Outcomes Partnership Common Data Model (OMOP CDM) databases. Executes data quality checks and provides an R `shiny` application to view the results.
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