EGRET3.0.10 package

Exploration and Graphics for RivEr Trends

as.egret

Create named list for EGRET analysis

blankTime

Deletes the computed values during periods of time when there are no s...

boxConcMonth

Box plot of the water quality data by month

boxConcThree

Three box plots side-by-side

boxQTwice

Two box plots side-by-side, discharge on sample days, and discharge on...

boxResidMonth

A box plot of WRTDS residuals by month

calculateMonthlyResults

Calculates monthly mean values of Q, Conc, FNConc, Flux, and FNFlux fo...

censoredSegments

Generic plotting function to create censored line segments

checkStartEndDate

checkStartEndDate

checkSurfaceSpan

checkSurfaceSpan

cleanUp

cleanUp eList

compressData

Compress sample data frame

concUnit-class

concUnit class

Constants

Constants included with EGRET

cumQdate

Cumulative flow calculation

dataOverview

Data Overview for WRTDS

dateFormatCheck

Check date format

decimalDate

decimalDate

decimalHighLow

decimalHighLow

EGRET-package

EGRET package includes WRTDS and flowHistory

errorStats

Error statistics

estCrossVal

Jack-Knife cross validation of the WRTDS (Weighted Regressions on Time...

estDailyFromSurfaces

Estimates all daily values of Concentration, Flux, Flow-Normalized Con...

estSurfaces

Estimate the three surfaces (for yHat, SE and ConcHat) as a function o...

fixSampleFrame

Update Sample dataframe

flexFN

Flexible Flow Normalization

flexPlotAddOn

Flexible Flow Normalization Plot Add On

flowDuration

Computes several values of the flow duration curve for streamflow cent...

fluxBiasMulti

Produces 8-panel plot that is useful for determining if there is a flu...

fluxBiasStat

Compute the flux bias statistic: (mean of estimated flux - mean of obs...

fluxUnit-class

fluxUnit class

generalAxis

Axis generation for log discharge

genericEGRETDotPlot

Generic EGRET plotting function

genmissing

genmissing

getDaily

Get Daily dataframe from EGRET object

getInfo

Get INFO dataframe from EGRET object

getSample

Get Sample dataframe from EGRET object

getSurfaces

Get surfaces matrix from EGRET object

helperEGRET

EGRET helper functions

INFOdataframe

Import metadata to create INFO data frame

is.egret

Check for EGRET object

jitterSam

jitter Sample

logPretty1

Sets up tick marks for an axis with a log scale, where the graph is sm...

logPretty3

Sets up tick marks for an axis with a log scale

makeAnnualSeries

Produces annual series of 8 streamflow statistics (and a lowess smooth...

makeAugmentedSample

Create randomized residuals and observations for data sets that have s...

makeDateInfo

makeDateInfo

mergeReport

mergeReport

modelEstimation

Estimation process for the WRTDS (Weighted Regressions on Time, Discha...

monthLabel-class

monthLabel class

multiPlotDataOverview

Produces a 4 panel plot that gives an overview of the data set prior t...

plot15

Makes 15 graphs of streamflow statistics on a single page. These encom...

plot1of15

plots 1 of the 15 graphs of streamflow statistics on a single page

plotConcHist

Graph of annual concentration and flow normalized concentration versus...

plotConcPred

Plot of Observed Concentration versus Estimated Concentration

plotConcQ

Plot of Observed Concentration versus Discharge

plotConcQSmooth

Plot up to three curves representing the concentration versus discharg...

plotConcTime

Plot of Observed Concentration versus Time

plotConcTimeDaily

Plot of the time series of daily concentration estimates and the sampl...

plotConcTimeSmooth

Plot up to three curves representing the concentration versus time rel...

plotContours

Color contour plot of the estimated surfaces as a function of discharg...

plotDiffContours

Plots the difference between two years from a contour plot created by ...

plotFlowSingle

Creates a plot of a time series of a particular flow statistic and a l...

plotFluxHist

Graph of annual flux and flow normalized flux versus year

plotFluxPred

Graph of observed versus estimated flux

plotFluxQ

Sample data plot: observed log flux vs log discharge

plotFluxTimeDaily

Plot of the time series of daily flux estimates and the sample values ...

plotFour

Makes four graphs of streamflow statistics on a single page

plotFourStats

Makes four graphs of annual streamflow statistics on a single page

plotMonthTrend

Plot monthly trend result from runPairs

plotQTimeDaily

Plot of the discharge time series

plotResidPred

Plot of the residuals from WRTDS versus the estimated values (all in l...

plotResidQ

Plot of the residuals from WRTDS (in log concentration units) versus t...

plotResidTime

Plot of the residuals from WRTDS (in log concentration units) versus t...

plotSDLogQ

Graph of the standard deviation of the log of daily discharge versus y...

plotTimeSlice

plotTimeSlice

plotWRTDSKalman

plotWRTDSKalman

populateConcentrations

Populate Concentration Columns

populateDaily

Populate Daily data frame

populateDailySamp

Merge concentration to Daily

populateDateColumns

Populate Date Columns

populateParameterINFO

Populate Parameter Information Columns

populateSampleColumns

Populate Sample Columns

populateSiteINFO

Populate Site Information Columns

printFluxUnitCheatSheet

Reminder to user of flux unit properties (such as kg/day, tons/year, e...

printGroups

Print information about group analysis

printPairs

Print information about pairs analysis

printqUnitCheatSheet

Reminder to user of flow Unit properties such as cubic meters per seco...

printSeries

Print annual results for a given streamflow statistic

processQWData

Processing of Water Quality Data

qUnit-class

qUnit class

randomSubset

randomSubset

readDataFromFile

Basic Data Import for Water Flow Data

readNWISDaily

Import NWIS Daily Data for EGRET analysis

readNWISSample

Import NWIS Sample Data for EGRET analysis

readUserDaily

Import user daily data for EGRET analysis

readUserSample

Import user-supplied sample data for EGRET analysis

readWQPSample

Import Sample Data from the Water Quality Portal for WRTDS

removeDuplicates

Remove duplicates values from Sample data frame.

runGroups

Runs a comparison of any group of years in the record.

runPairs

Runs a comparison of any two years in the record.

runSeries

Annual series of flow-normalized concentration and flow-normalized flu...

runSurvReg

Run the weighted survival regression for a set of estimation points (d...

sampleData

Example eList

saveResults

A utility program for saving the contents of the workspaceThis functio...

selectDays

Creates a subset Daily data frame that only contains daily estimates f...

setPA

Sets up the period of analysis (the portion of the year being evaluate...

setSeasonLabel

Create a character variable that describes the period of analysis, whe...

setSeasonLabelByUser

Creates a character variable that describes the period of analysis, wh...

setUpEstimation

setUpEstimation

setupYears

Creates the AnnualResults data frame from the Daily data frame

startEnd

startEnd

stitch

stitch surfaces

surfaceIndex

Compute the 6 parameters needed to lay out the grid for the surfaces c...

surfaceStartEnd

Surface date limits

tableChange

Create a table of the changes in flow-normalized values between variou...

tableFlowChange

Prints table of change metrics for a given streamflow statistic

tableResults

Table of annual results for discharge, concentration and flux

triCube

Tricube weight function

wrtdsK

WRTDS-Kalman

yPretty

Sets up tick marks for an axis for a graph with an arithmetic scale wh...

Statistics and graphics for streamflow history, water quality trends, and the statistical modeling algorithm: Weighted Regressions on Time, Discharge, and Season (WRTDS).

  • Maintainer: Laura DeCicco
  • License: CC0
  • Last published: 2024-11-20