Exploration and Visualisation of Skeletal Transcriptomics Data
Browse the skeletalvis database metadata
Get cosine similarity for a query dataset against the skeletalvis data...
Retrieve metadata for the SkeletalVis database
Retrieve the experiment table for the SkeletalVis database
Get the gene differential expression results for an experiment of inte...
Get gene differential expression results for genes of interest
Load SkeletalVis data
Plot ranked cosine similarity scores with top n labels
Search for experiments in SkeletalVis
SkeletalVis: Exploration and Visualisation of Skeletal Transcriptomics...
View curated osteoarthritis associated genes
View the OATarget gene network
View prioritised osteoarthritis associated genes
Volcano Plot of Gene Expression Data
Allows search and visualisation of a collection of uniformly processed skeletal transcriptomic datasets. Includes methods to identify datasets where genes of interest are differentially expressed and find datasets with a similar gene expression pattern to a query dataset Soul J, Hardingham TE, Boot-Handford RP, Schwartz JM (2019) <doi:10.1093/bioinformatics/bty947>.