SoilTaxonomy0.2.4 package

A System of Soil Classification for Making and Interpreting Soil Surveys

code_to_level

Determine taxonomic level of a taxonomic letter code

decompose_taxon_code

Decompose taxon letter codes

explainST

Explain a taxon name using formative elements

extractSMR

Extract Soil Moisture Regime from Subgroup or Higher Level Taxon

FormativeElements

Identify formative elements in taxon names at Soil Order, Suborder, Gr...

get_ST_family_classes

Get soil family / series differentiae and class names

get_ST_features

Get soil diagnostic horizons, characteristics and features

getChildTaxa

Get the lower (child) taxa for a taxon name or code

getLastChildTaxon

Get last child taxon in Keys at specified taxonomic level

getParentTaxa

Get the higher (parent) taxa for a taxon name or code

getTaxonAtLevel

Get the taxon name at the Soil Order, Suborder, Great Group or Subgrou...

hierarchy

Parent/Child Hierarchy

isValidST

Check for valid taxonomic level (Order, Suborder, Great Group, Subgrou...

level_hierarchy

Order of Hierarchical Levels in Soil Taxonomy

level_to_taxon

Get all taxa at specified level

newick_string

Generate Newick Tree Format Parenthetic Strings

parse_family

Parse components of a "family-level" taxon name

preceding_taxon_codes

Get taxon codes of preceding taxa

relative_taxon_code_position

Determine relative position of taxon within Keys to Soil Taxonomy (Ord...

SoilTaxonomy-package

SoilTaxonomy: A System of Soil Classification for Making and Interpret...

SoilTaxonomyLevels

Get (Ordered) Factors based on Soil Taxonomy Key position

taxon_code_to_taxon

Convert taxon code to taxon name

taxon_to_level

Determine taxonomic level of specified taxa

taxon_to_taxon_code

Convert taxon name to taxon code

taxonTree

Create a data.tree Object from Taxon Names

Taxonomic dictionaries, formative element lists, and functions related to the maintenance, development and application of U.S. Soil Taxonomy. Data and functionality are based on official U.S. Department of Agriculture sources including the latest edition of the Keys to Soil Taxonomy. Descriptions and metadata are obtained from the National Soil Information System or Soil Survey Geographic databases. Other sources are referenced in the data documentation. Provides tools for understanding and interacting with concepts in the U.S. Soil Taxonomic System. Most of the current utilities are for working with taxonomic concepts at the "higher" taxonomic levels: Order, Suborder, Great Group, and Subgroup.

  • Maintainer: Andrew Brown
  • License: GPL (>= 3)
  • Last published: 2023-11-16