massopt-class function

Class "massopt" stores options for fitting and plotting models for mass spectrometry data

Class "massopt" stores options for fitting and plotting models models for mass spectrometry data in particular; this is a subclass of class opt that contains options applicable to all model types class

Objects from the Class

Objects can be created by calls of the form new("massopt", ...) or massopt(...)

Slots

• axis.by:: Object of class "numeric" that allows labels on the bars representing the mass spectra to to skipped, e.g., axis.by=2 will add a label to every second bar
• scale.concen:: Object of class "logical" that scales the concentration matrix using the algorithm found in the function scaleConList.
• nummaxtraces:: Object of class "nummaxtraces" that defaults to zero; if greater than zero then this number of the traces with the maximum amplitude are plotted

Details

See opt-class and for the specification of fitting/plotting options that are not specific to the mass class type.

Author(s)

Katharine M. Mullen, Ivo H. M. van Stokkum

See Also

examineFit, fitModel, opt-class, specopt-class