TestCor0.0.2.2 package

FWER and FDR Controlling Procedures for Multiple Correlation Tests

ApplyFdrCor

Applies multiple testing procedures built to control (asymptotically) ...

ApplyFwerCor

Applies multiple testing procedures controlling (asymptotically) the F...

ApplyFwerCor_oracle

Applies an oracle version of MaxTinfty procedure described in Drton & ...

BHBootCor

Benjamini & Hochberg (1995)'s procedure for correlation testing with b...

BHCor

Benjamini & Hochberg (1995)'s procedure for correlation testing.

BonferroniCor

Bonferroni multiple testing procedure for correlations.

BonferroniCor_SD

Bonferroni multiple testing method for correlations with stepdown proc...

BootRWCor

Bootstrap multiple testing method of Romano & Wolf (2005) for correlat...

BootRWCor_SD

Boootstrap multiple testing method of Romano & Wolf (2005) for correla...

covD2nd

Returns the theoretical covariance of empirical correlations.

covDcor

Returns the theoretical covariance of empirical correlations.

covDcorNorm

Returns the theoretical covariance of test statistics for correlation ...

eval_stat

Evaluates the test statistics for tests on correlation matrix entries.

LCTboot

Bootstrap procedure LCT-B proposed by Cai & Liu (2016) for correlation...

LCTnorm

Procedure LCT-N proposed by Cai & Liu (2016) for correlation testing.

maxTinftyCor

Multiple testing method of Drton & Perlman (2007) for correlations.

maxTinftyCor_SD

Multiple testing method of Drton & Perlman (2007) for correlations, wi...

SidakCor

Sidak multiple testing procedure for correlations.

SidakCor_SD

Sidak multiple testing method for correlations with stepdown procedure...

SimuFdr

Simulates Gaussian data with a given correlation matrix and applies a ...

SimuFwer

Simulates Gaussian data with a given correlation matrix and applies a ...

SimuFwer_oracle

Simulates Gaussian data with a given correlation matrix and applies or...

TestCor-package

FWER and FDR controlling procedures for multiple correlation tests

UncorrectedCor

Uncorrected testing procedure for correlations.

unvectorize

Returns an upper-triangle matrix, without the diagonal, containing the...

vectorize

Returns a vector containing the upper triangle of a matrix, without th...

whichCor

Returns the indexes of an upper triangular matrix with logical entries...

Different multiple testing procedures for correlation tests are implemented. These procedures were shown to theoretically control asymptotically the Family Wise Error Rate (Roux (2018) <https://tel.archives-ouvertes.fr/tel-01971574v1>) or the False Discovery Rate (Cai & Liu (2016) <doi:10.1080/01621459.2014.999157>). The package gather four test statistics used in correlation testing, four FWER procedures with either single step or stepdown versions, and four FDR procedures.

  • Maintainer: Gannaz Irene
  • License: GPL (>= 2)
  • Last published: 2020-10-15