Download and Explore Datasets from UCSC Xena Data Hubs
Get or Check TCGA Available ProjectID, DataType and FileType
Get cohorts of XenaHub object
Get datasets of XenaHub object
Easily Download TCGA Data by Several Options
Fetch Data from UCSC Xena Hosts
Get TCGA Common Data Sets by Project ID and Property
Get hosts of XenaHub object
Pipe operator
Get Samples of a XenaHub object according to 'by' and 'how' action arg...
Show TCGA data structure by Project ID or ALL
Convert camel case to snake case
UCSC Xena Dynamic Objects
UCSC Xena Default Hosts
View Info of Dataset or Cohort at UCSC Xena Website Using Web browser
Get or Update Newest Data Information of UCSC Xena Data Hubs
Download Datasets from UCSC Xena Hubs
Filter a XenaHub Object
Generate and Subset a XenaHub Object from 'XenaData'
Class XenaHub
Generate a XenaHub Object
Prepare (Load) Downloaded Datasets to R
Query URL of Datasets before Downloading
Query ProbeMap URL of Datasets
Scan all rows according to user input by a regular expression
Download and explore datasets from UCSC Xena data hubs, which are a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others. Databases are normalized so they can be combined, linked, filtered, explored and downloaded.
Useful links