Meta-Analysis for Non-Integral Data
amanida
Get nice colour-blind colours
Import data
Report
Qualitative meta-analysis
Amanida harmonization
Combine statistical results and compute vote-counting
Plot for compounds divergence in reports
Function to sample data path
An S4 class to return results from compute_amanida or amanida_vote...
Volcano plot of combined results
Bar-plot for compounds vote-counting
Combination of results for meta-analysis using significance and effect size only. P-values and fold-change are combined to obtain a global significance on each metabolite. Produces a volcano plot summarising the relevant results from meta-analysis. Vote-counting reports for metabolites. And explore plot to detect discrepancies between studies at a first glance. Methodology is described in the Llambrich et al. (2021) <doi:10.1093/bioinformatics/btab591>.