betapart1.6 package

Partitioning Beta Diversity into Turnover and Nestedness Components

beta.multi.abund

Abundance-based multiple-site dissimilarities

beta.multi

Multiple-site dissimilarities

beta.pair.abund

Abundance-based pair-wise dissimilarities

beta.pair

Incidence-based pair-wise dissimilarities

beta.para.control

Specifying Control Values for Internal Parallel Cluster

beta.sample.abund

Resampling abundance-based multiple-site dissimilarity for n sites

beta.sample

Resampling multiple-site dissimilarity for n sites

beta.temp

Temporal change in community composition

betapart-package

Partitioning beta diversity into turnover and nestedness components

betapart.core.abund

Core calculations of betapart for abundance-based dissimilarity measur...

betapart.core

Core calculations of betapart

boot.coefs.decay

Bootstrapping the parameters of distance-decay models computed with de...

bray.part

Partitioning pair-wise Bray-Curtis dissimilarities

decay.model

Fitting distance decay models to pair-wise assemblage similarity

functional.beta.multi

Multiple-site functional dissimilarities

functional.beta.pair

Pair-wise functional dissimilarities

functional.betapart.core.pairwise

functional.betapart.core.pairwise

functional.betapart.core

Core calculations of functional dissimilarities metrics

inter_geom

Internal function to compute convexhull volume

inter_geom_coord

Internal function to compute convexhull volume and vertice coordinates

inter_rcdd

Internal function to compute convexhull volume

inter_rcdd_coord

Internal function to compute convexhull volume and vertice coordinates

phylo.beta.multi.rd

Multiple-site phylogenetic dissimilarities

phylo.beta.pair.rd

Pair-wise phylogenetic dissimilarities

phylo.betapart.core.rd

Core calculations of phylogenetic dissimilarities metrics

plot.decay

Plotting distance decay curves from models computed with decay.model()

qhull.opt

Specifying control Values for convexhull volume estimation

zdep

Assessing the differences between parameters of two distance-decay mod...

Functions to compute pair-wise dissimilarities (distance matrices) and multiple-site dissimilarities, separating the turnover and nestedness-resultant components of taxonomic (incidence and abundance based), functional and phylogenetic beta diversity.

  • Maintainer: Andres Baselga
  • License: GPL (>= 2)
  • Last published: 2023-03-13