Camera Trap Data Management and Analysis Framework
Plot kernel density estimation of single-species activity
Plot histogram of single-species activity
Plot overlapping kernel densities of two-species activities
Radial plots of single-species activity
Write a copyright tag into JPEG image metadata
Add a directory to PATH temporarily
Aggregate Camera Trap Table to Station Level
Add or remove species names from JPEG image filenames
Create a camera trap station operation matrix
Overview of the functions in the camtrapR package
Consistency check on species image identification
Check species names against the ITIS taxonomic database
commOccu objects
Create a community (multi-species) occupancy model for JAGS or Nimble
Extract covariate values from spatial rasters and prepare rasters for ...
Create species directories for species identification
Create camera trap station directories for raw camera trap images
Species detection histories for occupancy analyses
Generate maps of observed species richness and species presences by st...
validate memory before allocation
Show Exif metadata of JPEG images or other image or video formats
Filter species record table for temporal independence
Fit a community (multi-species) occupancy model
Fix DateTimeOriginal Exif metadata tag in Reconyx Hyperfire cameras
Collect all images of a species
Copy and rename images based on camera trap station ID and creation da...
Optical character recognition (OCR) from data fields in digital images
Plot effect sizes of covariates in community occupancy model
Plot Marginal Effects of Covariates
Calculate Community-Level Posterior Predictive Checks for Occupancy Mo...
Calculate Residuals from MCMC Output of Occupancy Models
Predictions from community occupancy models
Convert Camtrap DP format data to camtrapR format
Import Wildlife Insights data to camtrapR
Generate a species record table from camera trap images and videos
Generate a single-species record table with individual identification ...
Generate a capthist object for spatial capture-recapture analyses fr...
Species Accumulation Curves for Camera Trap Data
Summarize community occupancy model
Survey Dashboard for Camera Trap Data Analysis
Create a report about a camera trapping survey and species detections
Apply time shifts to JPEG image metadata
Write values to DateTimeOriginal tag in image metadata
Management and analysis of camera trap wildlife data through an integrated workflow. Provides functions for image/video organization and metadata extraction, species/individual identification. Creates detection histories for occupancy and spatial capture-recapture analyses, with support for multi-season studies. Includes tools for fitting community occupancy models in JAGS and NIMBLE, and an interactive dashboard for survey data visualization and analysis. Features visualization of species distributions and activity patterns, plus export capabilities for GIS and reports. Emphasizes automation and reproducibility while maintaining flexibility for different study designs.
Useful links