getBestAssociatedGeneSet function

Get best associated functional gene sets for partitions of gene i

getBestAssociatedGeneSet(pathway, all8Partitions, onePartition, MaxGene,
  minSupport)

Arguments

• pathway: All functional gene sets
• all8Partitions: All eight possible partitions for gene i
• onePartition: The partition to be associated with the functional gene set
• MaxGene: Number of genes in expression data
• minSupport: Minimum support for functional gene set

Returns

The adjusted p-values for the best associated gene set of the input partition