Analyzing Animal's Rhythmicity
Plot a an single actogram over a period of time for a specific variabl...
Plot daily average over a period of time for a specific variable.
Plot daily average over a period of time for a specific variable.
Outputs some information about the activity dataframe
Computes the Degree of Function coupling (DFC), Harmonic Part (HP) and...
Returns the periodicity of a digiRhythm dataframe
Computes the diurnality index, using different start and end definitio...
Computes the diurnality index based on an activity dataframe
Function to calculate the smallest possible harmonic to consider given...
Reads Raw Activity Data from csv files
Informs if a dataset is digiRhythm Friendly
Returns the level given the p-value computed with pbaluev (2008). Copi...
Computes the Lomb Scargle Periodogram and returns the information need...
Returns p-value of a frequency peak according to pbaluev (2008) given ...
Print if Verbose is true
Remove outliers from the data
Change the sampling of a digiRhythm friendly dataset
Analyze and visualize the rhythmic behavior of animals using the degree of functional coupling (See Scheibe (1999) <doi:10.1076/brhm.30.2.216.1420>), compute and visualize harmonic power, actograms, average activity and diurnality index.