PlotTreeDriftTest function

Plot results from TreeDriftTest

Plot which labels reject drift hypothesis.

PlotTreeDriftTest(test.list, tree, ...)

Arguments

• test.list: Output from TreeDriftTest
• tree: phylogenetic tree
• ...: adition arguments to plot

Returns

No return value, called for plot side effects

Examples

library(ape)
data(bird.orders)

tree <- bird.orders
mean.list <- llply(tree$tip.label, function(x) rnorm(5))
names(mean.list) <- tree$tip.label
cov.matrix.list <- RandomMatrix(5, length(tree$tip.label))
names(cov.matrix.list) <- tree$tip.label
sample.sizes <- runif(length(tree$tip.label), 15, 20)

test.list <- TreeDriftTest(tree, mean.list, cov.matrix.list, sample.sizes)
PlotTreeDriftTest(test.list, tree)

See Also

DriftTest TreeDriftTest

Author(s)

Diogo Melo