future.batchtools0.12.1 package

A Future API for Parallel and Distributed Processing using 'batchtools'

batchtools_custom

Batchtools futures for custom batchtools configuration

batchtools_local

batchtools local and interactive futures

batchtools_multicore

batchtools multicore futures

batchtools_ssh

batchtools SSH futures

batchtools_template

Batchtools futures for LSF, OpenLava, SGE, Slurm, TORQUE etc.

BatchtoolsFuture

A batchtools future is a future whose value will be resolved via batch...

BatchtoolsFutureError

FutureError class for errors related to BatchtoolsFuture:s

delete.BatchtoolsFuture

Removes a batchtools future

future.batchtools.options

Options used for batchtools futures

future.batchtools

future.batchtools: A Future for batchtools

grapes-resources-grapes

Temporarily tweaks the resources for the current batchtools strategy

loggedOutput

Logged output of batchtools future

nbrOfWorkers.batchtools

Gets the number of batchtools workers

print.BatchtoolsFuture

Prints a batchtools future

Download source packageRead PDF manual

Implementation of the Future API on top of the 'batchtools' package. This allows you to process futures, as defined by the 'future' package, in parallel out of the box, not only on your local machine or ad-hoc cluster of machines, but also via high-performance compute ('HPC') job schedulers such as 'LSF', 'OpenLava', 'Slurm', 'SGE', and 'TORQUE' / 'PBS', e.g. 'y <- future.apply::future_lapply(files, FUN = process)'.

  • Maintainer: Henrik Bengtsson
  • License: LGPL (>= 2.1)
  • Last published: 2023-12-20

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