Interactively Visualize Genetic Mutation Data using a Lollipop-Diagram
Shiny bindings for g3Lollipop
G3Lollipop plot options
Render g3lollipop diagram for the given mutation data
G3Lollipop chart options of built-in themes.
Query cancer genomic mutation data from cBioPortal
Guess column name for MAF file
Map from Hugo symbol to Pfam domains
Mapping from Hugo symbol to UniProt IDs
Map from mutation type (aka, variant classification) to mutation class
Extract amino_acid_position from Protein_Change
Read MAF file
From UniProt ID to Pfam-A domain composition
Interface for 'g3-lollipop' 'JavaScript' library. Visualize genetic mutation data using an interactive lollipop diagram in 'RStudio' or your web browser.