Visualising Output from Sequential Monte Carlo and Ensemble-Based Methods
Plot animated line graph showing parameter value vs dimension (reveale...
An animated histogram of a single variable across targets.
An animated density of a single variable across targets.
A histogram of a single variable from a single target.
Plot animated line graph showing parameter value vs dimension across t...
Convert IS, SMC or EnK output stored as a matrix to tidy format.
A density of a single variable.
Plot an SMC or EnK genealogy from algorithm output.
A histogram of a single variable.
A histogram of a single variable from a single target
Plot line graph showing parameter value vs dimension from algorithm ou...
Functions for plotting, and animating, the output of importance samplers, sequential Monte Carlo samplers (SMC) and ensemble-based methods. The package can be used to plot and animate histograms, densities, scatter plots and time series, and to plot the genealogy of an SMC or ensemble-based algorithm. These functions all rely on algorithm output to be supplied in tidy format. A function is provided to transform algorithm output from matrix format (one Monte Carlo point per row) to the tidy format required by the plotting and animating functions.
Useful links