Analysing and Plotting Genotype-Phenotype Maps
Decompose genotype-phenotype map(s) using monotone regression
Degree of monotonicity of GP map
Function for enumerating genotypes for biallelic loci
Function for creating genotype-phenotype (GP) maps
Tools for analysing and plotting genotype-phenotype maps
Perform monotone regression on a genotype-phenotype (GP) map
Generate partial ordering of genotype space based from allele content ...
Functions for creating lineplots of genotype-phenotype (GP) maps
Print function for gpmap objects
Tools for studying genotype-phenotype maps for bi-allelic loci underlying quantitative phenotypes. The 0.1 version is released in connection with the publication of Gjuvsland et al (2013) and implements basic line plots and the monotonicity measures for GP maps presented in the paper. Reference: Gjuvsland AB, Wang Y, Plahte E and Omholt SW (2013) Monotonicity is a key feature of genotype-phenotype maps. Frontier in Genetics 4:216 <doi:10.3389/fgene.2013.00216>.