Estimating and Displaying Population Attributable Fractions
Automatic fitting of probability models in a pre-specified Bayesian ne...
Calculation of average and sequential paf taking into account risk fac...
Clean a dataset to make model fitting more efficient
Internal: Simulate a column from the post intervention distribution co...
Estimating and Displaying Population Attributable Fractions
Internal: Calculation of an impact fraction using the Bruzzi approach
Internal: Calculation of an impact fraction using the direct approach
General calculations of impact fractions
Calculation of joint attributable fractions over several risk factors ...
Calculation of attributable fractions with a continuous exposure
Calculation of attributable fractions using a categorized risk factor
Implementation of Levin's formula for summary data
Implementation of Miettinen's formula for summary data
Plot impact fractions corresponding to risk-quantiles over several ris...
Create a fan_plot of a rf.data.frame object
Produce plots of sequential and average PAF
Plot hazard ratios, odds ratios or risk ratios comparing differing val...
Internal: Create a data frame for predictions (when risk factor is con...
Internal: Create a data frame for predictions (when risk factor is dis...
Print out PAF_q for differing risk factors
Print out a SAF_summary object
Estimate pathway specific population attributable fractions
Internal, pathway specific PAF when the mediator is discrete
Create a rf.data.frame object
Return the vector of risk quantiles for a continuous risk factor.
Calculation of sequential PAF taking into account risk factor sequenci...
Internal: Simulate from the post intervention distribution correspondi...
Estimation and display of various types of population attributable fraction and impact fractions. As well as the usual calculations of attributable fractions and impact fractions, functions are provided for attributable fraction nomograms and fan plots, continuous exposures, for pathway specific population attributable fractions, and for joint, average and sequential population attributable fractions.
Useful links