healthiar0.2.2 package

Quantifying and Monetizing Health Impacts Attributable to Exposure

add_info

Add meta-information to the data frame containing the input data

attribute_health

Attribute health impacts to an environmental stressor

attribute_lifetable

Attribute premature deaths or YLL to an environmental stressor using a...

attribute_master

Attributabe health impact to an environmental stressor

attribute_mod

Create a scenario 2 by modifying an existing scenario 1 and determine ...

cba

Cost-benefit analysis

check_if_args_identical

Check if arguments are identical before stop

collapse_df_by_group

Collapse rows by grouping columns

compare

Compare the attributable health impacts between two scenarios

compile_input

Compile input

daly

Attributable disability-adjusted life years

discount

Discount health impacts

find_joining_columns

Find joining columns

find_multi_value_col_names

Find columns with multiple values

get_discount_factor

Get discount factor

get_impact_with_lifetable

Get population impact over time

get_impact

Attributable health cases based on relative risk

get_inflation_factor

Get inflation factor

get_input_args

get_input_args

get_output

Obtain and store output

get_paf

Get population attributable fraction

get_pif

Get population impact fraction

get_pop_fraction

Get population attributable or impact fraction

get_ref_prop_pop

Calculates reference proportion of population

get_risk_and_pop_fraction

Get input data and PAF

get_risk

Get the relative risk of an exposure level

monetize

Monetize health impacts

multiexpose

Aggregate health impacts from multiple exposures

prepare_exposure

Prepare exposure data

prepare_lifetable

Convert multi-year life table to single year life table

prepare_mdi

Create the BEST-COST Multidimensional Deprivation Index (MDI)

socialize

Consider socio-economic aspects in healthiar assessments

standardize

Obtain age-standardized health impacts

summarize_uncertainty

Get Monte Carlo confidence intervals

validate_input_attribute

Check the input_args data of attribute_master()

This R package has been developed with a focus on air pollution and noise but can applied to other exposures. The initial development has been funded by the European Union project BEST-COST. Disclaimer: It is work in progress and the developers are not liable for any calculation errors or inaccuracies resulting from the use of this package. References (in chronological order): WHO (2003a) "Assessing the environmental burden of disease at national and local levels" <https://www.who.int/publications/i/item/9241546204> (accessed October 2025); WHO (2003b) "Comparative quantification of health risks: Conceptual framework and methodological issues" <doi:10.1186/1478-7954-1-1> (accessed October 2025); Miller & Hurley (2003) "Life table methods for quantitative impact assessments in chronic mortality" <doi:10.1136/jech.57.3.200> (accessed October 2025); Steenland & Armstrong (2006) "An Overview of Methods for Calculating the Burden of Disease Due to Specific Risk Factors" <doi:10.1097/01.ede.0000229155.05644.43> (accessed October 2025); Miller (2010) "Report on estimation of mortality impacts of particulate air pollution in London" <https://cleanair.london/app/uploads/CAL-098-Mayors-health-study-report-June-2010-1.pdf> (accessed October 2025); WHO (2011) "Burden of disease from environmental noise" <https://iris.who.int/items/723ab97c-5c33-4e3b-8df1-744aa5bc1c27> (accessed October 2025); Jerrett et al. (2013) "Spatial Analysis of Air Pollution and Mortality in California" <doi:10.1164/rccm.201303-0609OC> (accessed October 2025); GBD 2019 Risk Factors Collaborators (2020) "Global burden of 87 risk factors in 204 countries and territories, 1990–2019" <doi:10.1016/S0140-6736(20)30752-2> (accessed October 2025); VanderWeele (2019) "Optimal Approximate Conversions of Odds Ratios and Hazard Ratios to Risk Ratios" <doi: 10.1111/biom.13197> (accessed October 2025); WHO (2020) "Health impact assessment of air pollution: AirQ+ life table manual" <https://iris.who.int/bitstream/handle/10665/337683/WHO-EURO-2020-1559-41310-56212-eng.pdf?sequence=1> (accessed October 2025); ETC HE (2022) "Health risk assessment of air pollution and the impact of the new WHO guidelines" <https://www.eionet.europa.eu/etcs/all-etc-reports> (accessed October 2025); Kim et al. (2022) "DALY Estimation Approaches: Understanding and Using the Incidence-based Approach and the Prevalence-based Approach" <doi:10.3961/jpmph.21.597> (accessed October 2025); Pozzer et al. (2022) "Mortality Attributable to Ambient Air Pollution: A Review of Global Estimates" <doi:10.1029/2022GH000711> (accessed October 2025); Teaching group in EBM (2022) "Evidence-based medicine research helper" <https://ebm-helper.cn/en/Conv/HR_RR.html> (accessed October 2025).

  • Maintainer: Alberto Castro
  • License: GPL (>= 3)
  • Last published: 2026-01-09