Marker-Based Estimation of Heritability Using Individual Plant or Plot Data
Flowering time data taken from Atwell et al. (2010).
Marker-Based Estimation of Heritability Using Individual Plant or Plot...
Marker-based relatedness matrices for 3 populations of Arabidopsis tha...
Arabidopsis leaf area data for the hapmap and Swedish regmap popul...
Compute a marker-based estimate of heritability, given phenotypic obse...
Compute a marker-based estimate of heritability, given genotypic means...
Flowering time from Atwell et al. (2010): accession means.
Covariance matrix of the accession means for flowering time.
ANOVA-based estimates of repeatability
Implements marker-based estimation of heritability when observations on genetically identical replicates are available. These can be either observations on individual plants or plot-level data in a field trial. Heritability can then be estimated using a mixed model for the individual plant or plot data. For comparison, also mixed-model based estimation using genotypic means and estimation of repeatability with ANOVA are implemented. For illustration the package contains several datasets for the model species Arabidopsis thaliana.