iglu4.2.2 package

Interpreting Glucose Data from Continuous Glucose Monitors

above_percent

Calculate percentage of values above target thresholds

active_percent

Calculate percentage of time CGM was active

adrr

Calculate average daily risk range (ADRR)

agp_metrics

Calculate metrics for the Ambulatory Glucose Profile (AGP)

agp

Display Ambulatory Glucose Profile (AGP) statistics for selected subje...

all_metrics

Calculate all metrics in iglu

auc

Calculate Area Under Curve AUC

below_percent

Calculate percentage below targeted values

calculate_sleep_wake

Calculate metrics for values inside and/or outside a specified time ra...

CGMS2DayByDay

Interpolate glucose value on an equally spaced grid from day to day

cogi

Calculate Continuous Glucose Monitoring Index (COGI) values

conga

Continuous Overall Net Glycemic Action (CONGA)

cv_glu

Calculate Coefficient of Variation (CV) of glucose levels

cv_measures

Calculate Coefficient of Variation subtypes

ea1c

Calculate eA1C

epicalc_profile

Display Episode Calculation statistics for selected subject

episode_calculation

Calculates Hypo/Hyperglycemic episodes with summary statistics

gmi

Calculate GMI

grade_eugly

Percentage of GRADE score attributable to target range

grade_hyper

Percentage of GRADE score attributable to hyperglycemia

grade_hypo

Percentage of GRADE score attributable to hypoglycemia

grade

Calculate mean GRADE score

gri

Calculate Glycemia Risk Index (GRI)

gvp

Calculate Glucose Variability Percentage (GVP)

hbgi

Calculate High Blood Glucose Index (HBGI)

hist_roc

Plot histogram of Rate of Change values (ROC)

hyper_index

Calculate Hyperglycemia Index

hypo_index

Calculate Hypoglycemia Index

igc

Calculate Index of Glycemic Control

iglu_shiny

Run IGLU Shiny App

in_range_percent

Calculate percentage in targeted value ranges

iqr_glu

Calculate glucose level iqr

j_index

Calculate J-index

lbgi

Calculate Low Blood Glucose Index (LBGI)

m_value

Calculate the M-value

mad_glu

Calculate Median Absolute Deviation (MAD)

mag

Calculate the Mean Absolute Glucose (MAG)

mage_ma_single

Calculates Mean Amplitude of Glycemic Excursions (see "mage")

mage

Calculate Mean Amplitude of Glycemic Excursions

meal_metrics

Calculate Meal Metrics

mean_glu

Calculate mean glucose level

median_glu

Calculate median glucose level

metrics_heatmap

Create a heatmap of metric values by subject based on hierarchical clu...

modd

Calculate mean difference between glucose values obtained at the same ...

optimized_iglu_functions

Optimized Calculations of Time Dependent iglu Metrics

pgs

Calculate Personal Glycemic State (PGS)

pipe

Pipe operator

plot_agp

Plot Ambulatory Glucose Profile (AGP) modal day

plot_daily

Plot daily glucose profiles

plot_glu

Plot time series and lasagna plots of glucose measurements

plot_lasagna_1subject

Lasagna plot of glucose values for 1 subject aligned across times of d...

plot_lasagna

Lasagna plot of glucose values for multiple subjects

plot_meals

Plot meal metrics visualization

plot_ranges

Plot Time in Ranges as a bar plot

plot_roc

Plot time series of glucose colored by rate of change

process_data

Data Pre-Processor

quantile_glu

Calculate glucose level quantiles

range_glu

Calculate glucose level range

read_raw_data

Read raw data from a variety of common sensors.

roc

Calculate the Rate of Change at each time point (ROC)

sd_glu

Calculate sd glucose level

sd_measures

Calculate SD subtypes

sd_roc

Calculate the standard deviation of the rate of change

summary_glu

Calculate summary glucose level

Implements a wide range of metrics for measuring glucose control and glucose variability based on continuous glucose monitoring data. The list of implemented metrics is summarized in Rodbard (2009) <doi:10.1089/dia.2009.0015>. Additional visualization tools include time-series plots, lasagna plots and ambulatory glucose profile report.

  • Maintainer: Irina Gaynanova
  • License: GPL-2
  • Last published: 2025-01-14