lmerTest3.1-3 package

Tests in Linear Mixed Effects Models

anova.lmerModLmerTest

ANOVA Tables for Linear Mixed Models

as.data.frame.ls_means

Coerce ls_means Objects to data.frames

as_lmerModLmerTest

Coerce lmerMod Objects to lmerModLmerTest

containment

Determine the Containment Structure for All Terms in a Model

contest.lmerModLmerTest

Test of Contrasts

contest

Generic Contrast Test Functions

contest1D.lmerModLmerTest

Contrast Tests in 1D

contestMD.lmerModLmerTest

Multiple Degrees-of-Freedom Contrast Tests

devfun_vp

Compute Deviance of an LMM as a Function of Variance Parameters

doolittle

Doolittle Decomposition

drop1.lmerModLmerTest

Drop Marginal Terms from Model

ensure_full_rank

Ensure a Design Matrix has Full (Column) Rank

get_contrasts_type1

Type I ANOVA table contrasts

get_contrasts_type3

Contrasts for Type III Tests

get_covbeta

Compute cov(beta) as a Function of varpar of an LMM

get_Fstat_ddf

Compute denominator df for F-test

get_model

Extract Model from an Object

get_model_matrix

Extract or remake model matrix from model

get_rdX

Compute the 'Full' Rank-Deficient Design Matrix

is_estimable

Estimability of Contrasts

legacy

Methods for Legacy lmerTest Objects

lmer

Fit Linear Mixed-Effects Models

lmerModLmerTest-class

Represent Linear Mixed-Effects Models

lmerTest-package

lmerTest: Tests in Linear Mixed Effects Models

ls_means.lmerModLmerTest

LS-means for lmerTest Model Fits

ls_means

LS-means Generic Function

merModLmerTest-class

Legacy lmerTest representation of Linear Mixed-Effects Models

nullspace

Nullspace

plot.ls_means

Bar Plots of LS-Means

plot.step_list

Plot LS-means for Backward Reduced Model

qform

Compute Quadratic Form

ranova

ANOVA-Like Table for Random-Effects

rbindall

rbind Multiple Objects

rm_complete_terms

Remove Terms from Formula

show_tests.anova

Show Hypothesis Tests in ANOVA Tables

show_tests.ls_means

Show LS-means Hypothesis Tests and Contrasts

show_tests

Show Tests Generic Function and Default Method

single_anova

ANOVA Tables for Linear Mixed Models

step.lmerModLmerTest

Backward Elimination for Linear Mixed Models

step

Generic Step Function

summary.lmerModLmerTest

Summary Method for Linear Mixed Models

term_contain

Determine which Terms Contain a Term

Provides p-values in type I, II or III anova and summary tables for lmer model fits (cf. lme4) via Satterthwaite's degrees of freedom method. A Kenward-Roger method is also available via the pbkrtest package. Model selection methods include step, drop1 and anova-like tables for random effects (ranova). Methods for Least-Square means (LS-means) and tests of linear contrasts of fixed effects are also available.

  • Maintainer: Rune Haubo Bojesen Christensen
  • License: GPL (>= 2)
  • Last published: 2020-10-23