mpath0.4-2.26 package

Regularized Linear Models

meatReg

Meat Matrix Estimator

gfunc

Convert response value to raw prediction in GLM

glmreg_fit

Internal function to fit a GLM with lasso (or elastic net), snet and m...

be_zeroinfl

conduct backward stepwise variable elimination for zero inflated count...

breadReg

Bread for Sandwiches in Regularized Estimators

compute_g

Compute concave function values

compute_wt

Weight value from concave function

conv2glmreg

convert glm object to class glmreg

conv2zipath

convert zeroinfl object to class zipath

cv.glmreg_fit

Internal function of cross-validation for glmreg

cv.glmreg

Cross-validation for glmreg

cv.glmregNB

Cross-validation for glmregNB

cv.irglmreg_fit

Internal function of cross-validation for irglmreg

glmreg

fit a GLM with lasso (or elastic net), snet or mnet regularization

glmregNB

fit a negative binomial model with lasso (or elastic net), snet and mn...

cv.irglmreg

Cross-validation for irglmreg

cv.irsvm_fit

Internal function of cross-validation for irsvm

cv.irsvm

Cross-validation for irsvm

cv.nclreg_fit

Internal function of cross-validation for nclreg

cv.nclreg

Cross-validation for nclreg

cv.zipath_fit

Cross-validation for zipath

cv.zipath

Cross-validation for zipath

estfunReg

Extract Empirical First Derivative of Log-likelihood Function

hessianReg

Hessian Matrix of Regularized Estimators

irglm

fit a robust generalized linear models

irglmreg_fit

Internal function for robust penalized generalized linear models

irglmreg

Fit a robust penalized generalized linear models

irsvm_fit

Fit iteratively reweighted support vector machines for robust loss fun...

irsvm

fit case weighted support vector machines with robust loss functions

loss2_ccsvm

Composite Loss Value for epsilon-insensitive Type

loss2

Composite Loss Value

loss3

Composite Loss Value for GLM

methods

Methods for mpath Objects

mpath-internal

Internal mpath functions

ncl_fit

Internal function to fit a nonconvex loss based robust linear model

ncl

fit a nonconvex loss based robust linear model

nclreg_fit

Internal function to fitting a nonconvex loss based robust linear mode...

nclreg

Optimize a nonconvex loss with regularization

p_zipath

compute p-values from penalized zero-inflated model with multi-split d...

plot.glmreg

plot coefficients from a "glmreg" object

predict.glmreg

Model predictions based on a fitted "glmreg" object.

predict.zipath

Methods for zipath Objects

rzi

random number generation of zero-inflated count response

sandwichReg

Making Sandwiches with Bread and Meat for Regularized Estimators

se

Standard Error of Regularized Estimators

stan

standardize variables

summary.glmregNB

Summary Method Function for Objects of Class 'glmregNB'

tuning_zipath

find optimal path for penalized zero-inflated model

update_wt

Compute weight value

zipath_fit

Internal function to fit zero-inflated count data linear model with la...

zipath

Fit zero-inflated count data linear model with lasso (or elastic net),...

Algorithms compute robust estimators for loss functions in the concave convex (CC) family by the iteratively reweighted convex optimization (IRCO), an extension of the iteratively reweighted least squares (IRLS). The IRCO reduces the weight of the observation that leads to a large loss; it also provides weights to help identify outliers. Applications include robust (penalized) generalized linear models and robust support vector machines. The package also contains penalized Poisson, negative binomial, zero-inflated Poisson, zero-inflated negative binomial regression models and robust models with non-convex loss functions. Wang et al. (2014) <doi:10.1002/sim.6314>, Wang et al. (2015) <doi:10.1002/bimj.201400143>, Wang et al. (2016) <doi:10.1177/0962280214530608>, Wang (2021) <doi:10.1007/s11749-021-00770-2>, Wang (2024) <doi:10.1111/anzs.12409>.

  • Maintainer: Zhu Wang
  • License: GPL-2
  • Last published: 2024-06-27