Calculate the NLTT Statistic
Stretch matrix 'm' with a timestep resolution of 'dt'.
A function to perform Approximate Bayesian Computation within a Sequen...
Checks that event times are correct
Check if the input is a valid collection of one or more phylogenies
Check if the step type is valid
Check if the time unit is valid
This function does nothing. It is intended to inherit is parameters' d...
Get the average nLTT from a collection of phylogenies
Collect the branching times from the stem age
Collect the number of lineages from the stem age
Get the nLTT values in time
Collect the normalized branching times from the stem age
Collect the normalized number of lineages from the stem age
Extract the nLTT matrix from a phylogeny
function, using a Monte Carlo Markov Chain
Internal nLTT functions
Package providing functions to visualize the normalized Lineage-Throug...
Calculates the exact difference between the lineage through time curve...
Calculates the exact, difference between the lineage through time curv...
Calculates the exact difference between the nLTT curves of the branchi...
Calculates the exact difference between the nLTT curves of the event t...
Calculates the exact difference between the nLTT curves of the event t...
Calculates the exact difference between the nLTT curves of the branchi...
Normalized version of the ape function ltt.lines.
Normalized version of the ape function ltt.plot
Calculates the nLTT statistic between each phylogeny in a collection c...
Get the average nLTT from a collection of phylogenies
Calculate the difference between two normalized Lineage-Through-Time c...
Calculate the exact difference between two normalized Lineage-Through-...
Provides functions to calculate the normalised Lineage-Through- Time (nLTT) statistic, given two phylogenetic trees. The nLTT statistic measures the difference between two Lineage-Through-Time curves, where each curve is normalised both in time and in number of lineages.