neonSoilFlux1.0.0 package

Compute Soil Carbon Fluxes for the National Ecological Observatory Network Sites

diffusivity

Compute soil diffusivity

env_fingerprint_plot

Helper function to plot QF results for environmental measurements.

acquire_neon_data

Acquire NEON data for processing

check_qf_flags

Internal helper function to determine availability of data within a ti...

co2_to_umol

Convert co2 concentration from ppm to µmol m-3 units

compute_monthly_mean

Function to compute monthly means for a given month of NEON data.

compute_neon_flux

Compute NEON fluxes at a site

compute_surface_flux

Internal fucntion to compute CO2 surface flux

correct_env_data

Internal function that prepares downloaded NEON data for flux processi...

dejong_shappert_flux

Internal function to compute surface co2 flux at a given timepoint via...

depth_interpolate

Internal function to interpolate different depth measurements

determine_position

Internal function to determine the depth of a measurement

fit_function

Internal function that interpolates a soil measurement to different de...

flux_fingerprint_plot

Helper function to plot QF results for fluxes.

hirano_flux

Internal function to compute surface co2 flux at a given timepoint via...

insert_mean

Internal function that inserts smoothed mean value of a measurement at...

inside_interval

Determine if a YYYY-MM string is inside a interval

measurement_detect

Internal function that makes sure for each time, position, and depth w...

measurement_merge

Internal function that filters environmental data for easier processin...

neonSoilFlux-package

neonSoilFlux: Compute Soil Carbon Fluxes for the National Ecological O...

quadrature_error

Helper function to quickly compute the quadrature error

swc_correct

Internal function to correct depths for VSWC NEON data.

swc_corrections

Corrected sensor locations for NEON soil water content data

tang_2003_flux

Internal function to compute surface co2 flux at a given timepoint via...

tang_2005_flux

Internal function to compute surface co2 flux at a given timepoint via...

Acquires and synthesizes soil carbon fluxes at sites located in the National Ecological Observatory Network (NEON). Provides flux estimates and associated uncertainty as well as key environmental measurements (soil water, temperature, CO2 concentration) that are used to compute soil fluxes.

  • Maintainer: John Zobitz
  • License: GPL (>= 3)
  • Last published: 2024-05-25