testSegRatio function

S3 class testSegRatio

An S3 class which contains results of classic tests for assessing marker dosage in autopolyploids using chi-squared tests or binomial confidence intervals

Returns

Returns object of class testSegRatio with components - probability: matrix of probabilities under the test for each dosage where columns are doses and rows are markers

• dosage: vector of allocated dosages where allocation unique otherwise NA

• allocated: matrix of 0's and 1's where 1 indicates dosage allocation where columns are doses and rows are markers

• alpha: alpha level for significance test or CI construction

• expected.ratios: expected segregation ratios under null hypotheses

• call: call to test.segRatio

References

• K Mather(1951) The measurement of linkage in heredity. Methuen London
• Ripol, M I et al(1999) Statistical aspects of genetic mapping in autopolyploids. Gene 235 31--41

Author(s)

Peter Baker p.baker1@uq.edu.au

See Also

segRatio, expected.segRatio, test.segRatio