Simulate and Test Marker Dosage for Dominant Markers in Autopolyploids
Misclassifies marker data in objects of class autoMarker or autoCross
Adds missing data to objects of class autoMarker or autoCross
Automatically fill out blanks of a vector with the preceding label
Divide markers by parental type
S3 class divideAutoMarkers
Compute theoretical segregation proportions for regular autopolyploids
Generate labels from two columns where blanks in first column are repl...
Plot segregation ratios for either observed or simulated marker data
Segregation Ratios for Autoployploids
Print segregation ratios
Print objects of class simAutoMarkers
Print objects of class testSegRatio
S3 class segRatio
Compute observed segregation proportions for dominant markers in autop...
Simulate dominant markers for an autopolyploid cross for all parental ...
Simulates dominant markers from an autopolyploid cross
S3 class simAutoCross
S3 class simAutoMarkers
Classic tests for assessing marker dosage in autopolyploids
S3 class testSegRatio
Perform classic chi-squared tests and Ripol et al(1999) binomial confidence interval approach for autopolyploid dominant markers. Also, dominant markers may be generated for families of offspring where either one or both of the parents possess the marker. Missing values and misclassified markers may be generated at random.