summary.gDataMPP function

Summary function for the class gDataMPP

Summary function for the class gDataMPP

Gives a summary for an object of S3 class gDataMPP.

## S3 method for class 'gDataMPP' summary(object, ..., trials = NULL)

Arguments

  • object: An object of class gDataMPP.
  • ...: Not used.
  • trials: A vector of trials to include in the summary. These can be either numeric indices or character names of list items in pheno. If NULL, all trials are included.

Returns

A list with a most four components:

  • mapSum: A list with number of markers and number of chromosomes in the map.
  • markerSum: A list with number of markers, number of genotypes and the distribution of the values within the markers.
  • phenoSum: A list of data.frames, one per trial with a summary of all traits within the trial.
  • covarSum: A list of data.frames, one per trial with a summary of all covariates within the trial.

All components are only present in the output if the corresponding content is present in the gDataMPP object.