Tidy Tools for Paleoenvironmental Archives
Use an age depth model as a second ggplot axis
Age-depth model interpolators/extrapolators
Create age depth models
Coerce and validate transforms and functions that produce them
Facet for relative abundance data
Useful geometries for strat diagrams
Connect observations in the vertical direction
Exaggerated geometries that do not train scales
Vertical ribbons and area plots
Kellys Lake Data
Geochem facet labelers
Species facet labellers
Add a dendrogram as a layer or facet
Add scores to a plot
Perform an analysis on a nested data matrix
Prepare a parameter-long data frame for statistical analysis
Nested (Constrained) hierarchical clustering
Nested Principal Components Analysis (PCA)
Plot an age depth model using base graphics
Plot a nested analysis
Predict age and depth values
Objects exported from other packages
Common plot modifications for stratigraphic plots
Scales for relative abundance values
Age-depth scales
Change facet ordering behaviour
Display a dendrogram as a ggplot2 layer
A Paleo-friendly ggplot2 theme
tidypaleo: Tidy Tools for Paleoenvironmental Archives
Provides a set of functions with a common framework for age-depth model management, stratigraphic visualization, and common statistical transformations. The focus of the package is stratigraphic visualization, for which 'ggplot2' components are provided to reproduce the scales, geometries, facets, and theme elements commonly used in publication-quality stratigraphic diagrams. Helpers are also provided to reproduce the exploratory statistical summaries that are frequently included on stratigraphic diagrams. See Dunnington et al. (2021) <doi:10.18637/jss.v101.i07>.
Useful links