box_surv function

box_surv

draw box plot for a hub gene expression matrix

box_surv(exp_hub, exprSet_hub, meta)

Arguments

• exp_hub: an expression matrix for hubgenes
• exprSet_hub: a tumor expression set for hubgenes
• meta: meta data corresponds to expression set

Returns

patchwork result for hub genes boxplot and survival plot

Examples

if(requireNamespace("ggpubr",quietly = TRUE)) {
k = box_surv(log2(exp_hub1+1),exprSet_hub1,meta1);k[[1]]
}else{
 warning("Package 'ggpubr' needed for this function to work.
        Please install it by install.packages('ggpubr')")
}

See Also

exp_boxplot;exp_surv

Author(s)

Xiaojie Sun