interaction_to_edges function

interaction_to_edges

split interactions by sep paramter,return edges data.frame

interaction_to_edges(df, a = 1, b = 2, sep = ",")

Arguments

• df: interactions data.frame
• a: column to replicate
• b: column to split
• sep: a character string to separate b column

Returns

a new data.frame with two column ,one interaction by one rows

Examples

df = data.frame(a = c("gene1","gene2","gene3"),
b = c("d,f,a,b",
"c,e,g",
"a,b,d"))
interaction_to_edges(df)

See Also

edges_to_nodes

Author(s)

Xiaojie Sun