Testing Differences Between Families of Trees
Create hierarchical clustering trees for each cluster in a given matri...
Convert Hi-C to trees
Create a HiCDOCDataSet object from a set of files
Normalize count matrix using cyclic loess
Perform the treediff test
Perform test to detect differences in structure between families of trees. The method is based on cophenetic distances and aggregated Student's tests.
Useful links